The following peer-reviewed papers directly related to Cimbi have been published in 2011.

1. Abrahamsen TJ, Hansen LK. A Cure for Variance Inflation in High Dimensional Kernel Principal Component Analysis. Journal of Machine Learning Research 2011;12:2027-2044
2. Abrahamsen TJ, Hansen LK. Regularized Pre-Image Estimation for Kernel PCA De-Noising. Input space regularization and sparse reconstruction. Journal of Signal Processing Systems 2011;65(3):403-412
3. Abrahamsen TJ, Hansen LK. Sparse non-linear denoising: Generalization performance and pattern reproducibility in functional MRI. Pattern Recognition Letters 2011;32(15):2080-2085
4. Aznar S, Knudsen GM. Depression and Alzheimer's Disease: Is stress the initiating factor in a common neuropathological cascade? J Alzheimers Dis. 2011;23(2):177-93. Review
5. Dyrby TB, Baaré WFC, Alexander DC, Jelsing J, Garde E, Søgaard LV. An Ex Vivo Imaging Pipeline for Producing High-Quality and High-Resolution Diffusion-Weighted Imaging Datasets. Human Brain Mapping. 2011 Apr;32(4):544-63
6. Ebdrup BH, Skimminge A, Rasmussen H, Aggernaes B, Oranje B, Lublin H, Baaré W, Glenthøj B. Progressive striatal and hippocampal volume loss in initially antipsychotic-naive, first-episode schizophrenia patients treated with quetiapine: relationship to dose and symptoms. Int J Neuropsychopharmacol 2011;14(1):69-82
7. Erritzoe D, Frokjaer VG, Holst KK, Christoffersen M, Johansen SS, Svarer C, Madsen J, Rasmussen PM, Ramsøy T, Jernigan TL, Knudsen GM. In Vivo Imaging of Cerebral Serotonin Transporter and Serotonin2A Receptor Binding in 3,4-Methylenedioxymethamphetamine (MDMA or "Ecstasy") and Hallucinogen Users. Arch Gen Psychiatry. 2011;68(6):562-76.
8. Ettrup A, Hansen M, Santini MA, Paine J, Gillings N, Palner M, Lehel S, Herth MM, Madsen J, Kristensen J, Begtrup M, Knudsen GM. Radiosynthesis and in vivo evaluation of a series of substituted (11)C-phenethylamines as 5-HT (2A) agonist PET tracers. Eur J Nucl Med Mol Imaging. 2011 Apr;38(4):681-93
9. Ettrup A, Kornum B, Weikop P, Knudsen GM. An approach for serotonin depletion in pigs: Effects on serotonin receptor binding. Synapse 2011;65(2):136-45
10. Ettrup A, Mikkelsen JD, Lehel S, Madsen J, Nielsen EØ, Palner M, Timmermann DB, Peters D, Knudsen GM. 11C-NS14492 as a novel PET radioligand for imaging cerebral alpha7 nicotinic acetylcholine receptors: in vivo evaluation and drug occupancy measurements. J Nucl Med. 2011 Sep;52(9):1449-56
11. Hansen LK, Karadogan SG, Marchegiani L. What to measure next to improve decision making? - On topdown task driven feature saliency. IEEE Symposium on Computational Intelligence, CCMB Cognitive Algorithms, Mind, and Brain: pp. 81-87. 2011
12. Jennings KA, Licht CL, Bruce A, Lesch KP, Knudsen GM, Sharp T. Genetic variation in 5-hydroxytryptamine transporter expression causes adaptive changes in 5-HT4 receptor levels. Int J Neuropsychopharmacol 2011;1-9
13. Jernigan TL, Baaré WF, Stiles J, Madsen KS. Postnatal brain development: structural imaging of dynamic neurodevelopmental processes. Prog Brain Res. 2011;189:77-92. Review
14. Jimeno-Yepes A, Wilkowski B, Mork JG, Lenten EV, Fushman DD, Aronson AR. A bottom-up approach to MEDLINE indexing recommendations. American Medical Informatics Association Annual Symposium (1583-1592), 2011
15. Klein AB, Williamson R, Santini MA, Clemmensen C, Ettrup A, Rios M, Knudsen GM, Aznar S. Blood BDNF concentrations reflect brain tissue BDNF levels across species. The International Journal of Neuropsychopharmacology. 2011 Apr;14(3):347-53
16. Kornum BR, Knudsen GM. Cognitive testing of pigs pigs (Sus scrofa) in translational biobehavioral research. Neurosci Biobehav Rev 2011;35(3):437-51
17. Kupers R, Frokjaer V, Erritzoe D, Naert A, Budtz-Joergensen E, Nielsen FA, Kehlet H, Knudsen GM. Serotonin transporter binding in the hypothalamus correlates negatively with tonic heat pain ratings in healthy subjects: a [11C]DASB PET study. Neuroimage 2011;54(2):1336-43
18. Liu X, Cannon DM, Akula N, Moya PR, Knudsen GM, Arentzen TE, Steele J, Laje G, Drevets WC, McMahon FJ. A non-synonymous polymorphism in galactose mutarotase (GALM) is associated with serotonin transporter binding potential in the human thalamus: results of a genome-wide association study. Mol Psychiatry 2011; 16(6):584-585
19. Lou AR, Madsen KH, Paulson OB, Julian HO, Prause JU, Siebner HR, Kjaer TW. Monocular Visual Deprivation Suppresses Excitability in Adult Human Visual Cortex. Cereb Cortex 2011
20. Lund H, Jonsson A, Andresen J, Rostrup E, Paulson OB, Sorensen PS. Cognitive deficits in multiple sclerosis: correlations with T2 changes in normal appearing brain tissue. Acta Neurol Scand 2011
21. Madsen J, Elfving B, Frøkjær VG, Kornum BR, Thomsen G, Martiny L, Knudsen GM. Synthesis and Biological Evaluation of 125I/123I-Labelled Analogues of Citalopram and Escitalopram as Potential Radioligands for Imaging of the Serotonin Transporter. Journal of Labelled Compounds and Radiopharmaceuticals 2011 Apr;54(4):185-190
22. Madsen K, Erritzøe D, Mortensen E, Gade A, Madsen J, Baaré WF, Knudsen GM, Hasselbalch SG. Cognitive Function is Related to Fronto-striatal Serotonin Transporter Levels - A Brain PET Study in Young Healthy Subjects. Psychopharmacology (Berl). 2011 Feb;213(2-3):573-81
23. Madsen K, Haahr M, Marner L, Keller SH, Baaré W, Svarer C, Hasselbalch SG, Knudsen GM. Age and Sex Effects on 5-HT4 Receptors in the Human Brain – A [11C]SB207145 PET Study. Journal of Cerebral Blood Flow & Metabolism 2011 Jun;31(6):1475-81
24. Madsen K, Marner L, Haahr M, Gillings N, Knudsen GM. Mass dose effects and in vivo affinity in brain PET receptor studies – a study of cerebral 5-HT(4) receptor binding with [(11)C]SB207145. Nucl Med Biol. 2011 Nov;38(8):1085-91
25. Madsen K, Neumann WJ, Holst K, Marner L, Haahr MT, Lehel S, Knudsen GM, Hasselbalch SG. Cerebral serotonin 4 receptors and amyloid-β in early Alzheimer's disease. J Alzheimers Dis. 2011;26(3):457-66
26. Madsen KS, Baaré WF, Skimminge A, Vestergaard M, Siebner HR, Jernigan TL. Brain microstructural correlates of visuospatial choice reaction time in children. Neuroimage. 2011 Oct 15;58(4):1090-100
27. Marner L, Knudsen GM, Madsen K, Holm S, Baaré W, Hasselbalch SG. The reduction of Baseline Serotonin 2A Receptors in Mild Cognitive Impairment is stable at Two-year Follow-up. J Alzheimers Dis. 2011 Jan 1;23(3):453-9
28. Nejad AB, Ebdrup BH, Siebner HR, Rasmussen H, Aggernæs B, Glenthøj BY, Baaré WF. Impaired temporoparietal deactivation with working memory load in antipsychotic-naïve patients with first-episode schizophrenia. World J Biol Psychiatry. 2011 Jun;12(4):271-81
29. Palner M, Underwood M, Kumar D, Arango V, Knudsen GM, John J, Mann, Parsey RV. Ex vivo evaluation of the serotonin 1A receptor partial agonist [(3)H]CUMI-101 in awake rats. Synapse. 2011 Aug;65(8):715-23
30. Palner M, Kjaerby C, Knudsen GM, Cummings P. Effects of unilateral 6-OHDA lesion on [3H]NPA binding in striatum ex vivo, and vulnerability to amphetamine-evoked dopamine release in rat. Neurochem Int. 2011 Feb;58(3):243-7
31. Petersen MK, Stahlhut C, Stopczynski A, Larsen JE, Hansen LK. Smartphones get emotional: mind reading images and reconstructing the neural sources. In Proc. Affective Computing and Intelligent Interaction Lecture Notes in Computer Science. 2011;6975:578-587
32. Rasmussen H, Erritzøe D, Ebdrup B, Aggernaes B, Oranje B, Kalbitzer J, Madsen J, Pinborg L, Baaré W, Svarer C, Lublin H, Knudsen G, Glenthøj B. Serotonin2A receptor blockade and clinical effect in first-episode schizophrenia patients treated with quetiapine. Psychopharmacology (Berl). 2011 Feb;213(2-3):583-92
33. Rasmussen PM, Madsen KH, Lund TE, Hansen LK. Visualization of nonlinear kernel models in neuroimaging by sensitivity maps. Neuroimage. 2011 Apr 1;55(3):1120-31
34. Santini MA, Klein AB, El-Sayed M, Ratner C, Knudsen GM, Mikkelsen JD, Aznar S. Novelty-induced activity-regulated cytoskeletal-associated protein (Arc) expression in frontal cortex requires serotonin 2A receptor activation. Neuroscience 2011; 190:251-257
35. Stahlhut C, Mørup M, Winther O, Hansen LK. Simultaneous EEG Source and Forward Model Reconstruction (SOFOMORE) using a Hierarchical Bayesian Approach. Journal of Signal Processing Systems. 2011;65(3):431-444
36. Stopczynski A, Larsen JE, Stahlhut C, Petersen MK, Hansen LK. A smartphone interface for a wireless EEG headset with real-time 3D reconstruction. In Proc. Affective Computing and Intelligent Interaction Lecture Notes in Computer Science. 2011;6975:317-318
37. Vestergaard M, Madsen KS, Baaré WF, Skimminge A, Ejersbo LR, Ramsøy TZ, Gerlach C, Akeson P, Paulson OB, Jernigan TL. White Matter Microstructure in Superior Longitudinal Fasciculus Associated with Spatial Working Memory Performance in Children. J Cogn Neurosci. 2011 Sep;23(9):2135-46
38. Wilkowski B, Fiszman M, Miller CM, Hristovski D, Arabandi S, Rosemblat G, Rindflesch TC. Graph-Based Methods for Discovery Browsing with Semantic Predications. American Medical Informatics Association Annual Symposium (1514-1523), 2011